Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P01852 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.14■□□□□ 0.33
P01852 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
P01852 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.14■□□□□ 0.33
P01852 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01852 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P01852 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
P01852 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.13■□□□□ 0.33
P01852 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.13■□□□□ 0.33
P01852 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.13■□□□□ 0.33
P01852 Gm7514-201ENSMUST00000209475 934 ntBASIC17.13■□□□□ 0.33
P01852 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P01852 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
P01852 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01852 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01852 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01852 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01852 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01852 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.12■□□□□ 0.33
P01852 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01852 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01852 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01852 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.12■□□□□ 0.33
P01852 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01852 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.12■□□□□ 0.33
P01852 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01852 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
P01852 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.11■□□□□ 0.33
P01852 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.11■□□□□ 0.33
P01852 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01852 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01852 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.1■□□□□ 0.33
P01852 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
P01852 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
P01852 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01852 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P01852 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P01852 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.09■□□□□ 0.33
P01852 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.09■□□□□ 0.33
P01852 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01852 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P01852 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
P01852 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.08■□□□□ 0.33
P01852 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01852 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01852 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
P01852 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.07■□□□□ 0.32
P01852 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
P01852 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P01852 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01852 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
P01852 Gm37179-201ENSMUST00000194862 823 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms