Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dnmt3aO88508 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dnmt3aO88508 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dnmt3aO88508 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3aO88508 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.83■□□□□ 0.6
Dnmt3aO88508 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3aO88508 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3aO88508 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3aO88508 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dnmt3aO88508 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Gm10849-201ENSMUST00000100397 618 ntBASIC18.82■□□□□ 0.6
Dnmt3aO88508 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Gm13146-201ENSMUST00000118508 780 ntBASIC18.82■□□□□ 0.6
Dnmt3aO88508 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.82■□□□□ 0.6
Dnmt3aO88508 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.82■□□□□ 0.6
Dnmt3aO88508 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.81■□□□□ 0.6
Dnmt3aO88508 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dnmt3aO88508 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Dnmt3aO88508 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Dnmt3aO88508 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Dnmt3aO88508 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.78■□□□□ 0.6
Dnmt3aO88508 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.77■□□□□ 0.6
Dnmt3aO88508 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dnmt3aO88508 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnmt3aO88508 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms