Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Per2O54943 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Per2O54943 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Per2O54943 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Per2O54943 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.61■□□□□ 0.73
Per2O54943 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Per2O54943 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.61■□□□□ 0.73
Per2O54943 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.61■□□□□ 0.73
Per2O54943 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.61■□□□□ 0.73
Per2O54943 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Per2O54943 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Per2O54943 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Per2O54943 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Per2O54943 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Per2O54943 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Per2O54943 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Per2O54943 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.59■□□□□ 0.73
Per2O54943 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Per2O54943 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Per2O54943 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.59■□□□□ 0.73
Per2O54943 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Per2O54943 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.59■□□□□ 0.73
Per2O54943 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Per2O54943 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Per2O54943 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.58■□□□□ 0.72
Per2O54943 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.58■□□□□ 0.72
Per2O54943 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Per2O54943 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per2O54943 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Per2O54943 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per2O54943 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per2O54943 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.58■□□□□ 0.72
Per2O54943 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Per2O54943 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Per2O54943 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.57■□□□□ 0.72
Per2O54943 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Per2O54943 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Per2O54943 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.57■□□□□ 0.72
Per2O54943 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Per2O54943 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per2O54943 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.56■□□□□ 0.72
Per2O54943 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Per2O54943 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.56■□□□□ 0.72
Per2O54943 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.56■□□□□ 0.72
Per2O54943 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per2O54943 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms