Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Clk4O35493 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk4O35493 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk4O35493 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk4O35493 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clk4O35493 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Clk4O35493 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Clk4O35493 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.97■□□□□ 0.47
Clk4O35493 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clk4O35493 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clk4O35493 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.96■□□□□ 0.47
Clk4O35493 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Clk4O35493 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk4O35493 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk4O35493 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk4O35493 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Clk4O35493 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk4O35493 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clk4O35493 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.96■□□□□ 0.47
Clk4O35493 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.96■□□□□ 0.46
Clk4O35493 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Clk4O35493 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Gm7860-201ENSMUST00000121190 879 ntBASIC17.95■□□□□ 0.46
Clk4O35493 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.95■□□□□ 0.46
Clk4O35493 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk4O35493 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Clk4O35493 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk4O35493 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.94■□□□□ 0.46
Clk4O35493 Gm13146-201ENSMUST00000118508 780 ntBASIC17.94■□□□□ 0.46
Clk4O35493 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.94■□□□□ 0.46
Clk4O35493 Gm10033-202ENSMUST00000211874 928 ntBASIC17.94■□□□□ 0.46
Clk4O35493 Gm18671-201ENSMUST00000214826 683 ntBASIC17.94■□□□□ 0.46
Clk4O35493 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.94■□□□□ 0.46
Clk4O35493 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clk4O35493 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk4O35493 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clk4O35493 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Clk4O35493 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.93■□□□□ 0.46
Clk4O35493 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Reep4-203ENSMUST00000226563 1444 ntBASIC17.93■□□□□ 0.46
Clk4O35493 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.93■□□□□ 0.46
Clk4O35493 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.93■□□□□ 0.46
Clk4O35493 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.93■□□□□ 0.46
Clk4O35493 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk4O35493 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.92■□□□□ 0.46
Clk4O35493 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
Clk4O35493 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk4O35493 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.91■□□□□ 0.46
Clk4O35493 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk4O35493 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Clk4O35493 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Clk4O35493 Gm10849-201ENSMUST00000100397 618 ntBASIC17.91■□□□□ 0.46
Clk4O35493 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.91■□□□□ 0.46
Clk4O35493 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.91■□□□□ 0.46
Clk4O35493 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.91■□□□□ 0.46
Clk4O35493 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms