Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.1■■□□□ 1.29
Trim34bJ3QNR8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Trim34bJ3QNR8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim34bJ3QNR8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trim34bJ3QNR8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trim34bJ3QNR8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim34bJ3QNR8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.07■■□□□ 1.28
Trim34bJ3QNR8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Trim34bJ3QNR8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.07■■□□□ 1.28
Trim34bJ3QNR8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.07■■□□□ 1.28
Trim34bJ3QNR8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Gm12896-201ENSMUST00000118430 226 ntBASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim34bJ3QNR8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim34bJ3QNR8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Gm27275-201ENSMUST00000184318 272 ntBASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim34bJ3QNR8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Gm2559-201ENSMUST00000201323 363 ntBASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim34bJ3QNR8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim34bJ3QNR8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim34bJ3QNR8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34bJ3QNR8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34bJ3QNR8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim34bJ3QNR8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim34bJ3QNR8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23■■□□□ 1.27
Trim34bJ3QNR8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim34bJ3QNR8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms