Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 AV356131-201ENSMUST00000206201 750 ntBASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 BC021767-201ENSMUST00000126387 1716 ntBASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.94■□□□□ 0.14
Cpsf4lE9Q2N0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Golph3-205ENSMUST00000228671 2842 ntBASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cpsf4lE9Q2N0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Gm10849-201ENSMUST00000100397 618 ntBASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cpsf4lE9Q2N0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Gm7514-201ENSMUST00000209475 934 ntBASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4lE9Q2N0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cpsf4lE9Q2N0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Cpsf4lE9Q2N0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cpsf4lE9Q2N0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4lE9Q2N0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4lE9Q2N0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms