Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12887B1AVM1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12887B1AVM1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.26■□□□□ 0.03
Gm12887B1AVM1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12887B1AVM1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm12887B1AVM1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.24■□□□□ 0.03
Gm12887B1AVM1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12887B1AVM1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12887B1AVM1 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms