Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-3A0A140T8Q0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv3-3A0A140T8Q0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.36□□□□□ -0.59
Igkv3-3A0A140T8Q0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm6802-201ENSMUST00000167843 1983 ntBASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-3A0A140T8Q0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv3-3A0A140T8Q0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv3-3A0A140T8Q0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv3-3A0A140T8Q0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv3-3A0A140T8Q0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Golph3-205ENSMUST00000228671 2842 ntBASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-3A0A140T8Q0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-3A0A140T8Q0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms