Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12□□□□□ -0.49
Igkv8-30A0A140T8M3 Gm45640-201ENSMUST00000210665 1896 ntBASIC12□□□□□ -0.49
Igkv8-30A0A140T8M3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Igkv8-30A0A140T8M3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Igkv8-30A0A140T8M3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv8-30A0A140T8M3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-30A0A140T8M3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-30A0A140T8M3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-30A0A140T8M3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms