Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Gm38205-201ENSMUST00000192243 258 ntBASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Gm6211-202ENSMUST00000167849 925 ntBASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpl13a-ps1A0A140T8K2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm13534-201ENSMUST00000121169 513 ntBASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm13148-201ENSMUST00000118892 745 ntBASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.68■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpl13a-ps1A0A140T8K2 Gm6420-201ENSMUST00000193885 723 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms