Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-1A0A0G2JEU8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-1A0A0G2JEU8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-1A0A0G2JEU8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms