Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm18671-201ENSMUST00000214826 683 ntBASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav9-4A0A0B4J1K2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm42642-201ENSMUST00000200683 355 ntBASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9-4A0A0B4J1K2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9-4A0A0B4J1K2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav9-4A0A0B4J1K2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav9-4A0A0B4J1K2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav9-4A0A0B4J1K2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav9-4A0A0B4J1K2 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm8495-201ENSMUST00000188740 694 ntBASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9-4A0A0B4J1K2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Gm10033-202ENSMUST00000211874 928 ntBASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9-4A0A0B4J1K2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9-4A0A0B4J1K2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms