Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm8969-201ENSMUST00000199694 526 ntBASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-3A0A0B4J1H2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-3A0A0B4J1H2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms