Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Trbv3A0A0A6YYE2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv3A0A0A6YYE2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv3A0A0A6YYE2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Fst-202ENSMUST00000223640 2612 ntBASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv3A0A0A6YYE2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm43566-201ENSMUST00000196851 808 ntBASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm40881-201ENSMUST00000223397 166 ntBASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trbv3A0A0A6YYE2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.48□□□□□ -0.09
Trbv3A0A0A6YYE2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Gm10232-201ENSMUST00000089221 720 ntBASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv3A0A0A6YYE2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms