Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm13534-201ENSMUST00000121169 513 ntBASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm42569-201ENSMUST00000200539 472 ntBASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm7514-201ENSMUST00000209475 934 ntBASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.28□□□□□ -0.12
Ighv1-52A0A0A6YXC3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-52A0A0A6YXC3 Gm10849-201ENSMUST00000100397 618 ntBASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gm26571-201ENSMUST00000181399 666 ntBASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.26□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-52A0A0A6YXC3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms