Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-4A0A075B620 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-4A0A075B620 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.27□□□□□ -0.12
Trav7n-4A0A075B620 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Fst-202ENSMUST00000223640 2612 ntBASIC14.27□□□□□ -0.13
Trav7n-4A0A075B620 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Gm43530-201ENSMUST00000195920 274 ntBASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-4A0A075B620 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7n-4A0A075B620 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav7n-4A0A075B620 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav7n-4A0A075B620 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms