Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Smarcb1Q9Z0H3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcb1Q9Z0H3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcb1Q9Z0H3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcb1Q9Z0H3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcb1Q9Z0H3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcb1Q9Z0H3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcb1Q9Z0H3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcb1Q9Z0H3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smarcb1Q9Z0H3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcb1Q9Z0H3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcb1Q9Z0H3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms