Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Gm13234-201ENSMUST00000120010 747 ntBASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nif3l1Q9EQ80 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nif3l1Q9EQ80 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nif3l1Q9EQ80 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Gm18284-201ENSMUST00000172604 624 ntBASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nif3l1Q9EQ80 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Gm13146-201ENSMUST00000118508 780 ntBASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nif3l1Q9EQ80 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nif3l1Q9EQ80 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Gm18671-201ENSMUST00000214826 683 ntBASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nif3l1Q9EQ80 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms