Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ap3s1Q9DCR2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ap3s1Q9DCR2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ap3s1Q9DCR2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Gm10420-201ENSMUST00000121713 882 ntBASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ap3s1Q9DCR2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap3s1Q9DCR2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap3s1Q9DCR2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap3s1Q9DCR2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ap3s1Q9DCR2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms