Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nop56Q9D6Z1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nop56Q9D6Z1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nop56Q9D6Z1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nop56Q9D6Z1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nop56Q9D6Z1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nop56Q9D6Z1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.46■□□□□ 0.71
Nop56Q9D6Z1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nop56Q9D6Z1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop56Q9D6Z1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Nop56Q9D6Z1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
Nop56Q9D6Z1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms