Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.52■□□□□ 0.55
5530400C23RikQ9D3I0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
5530400C23RikQ9D3I0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
5530400C23RikQ9D3I0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Reep4-203ENSMUST00000226563 1444 ntBASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
5530400C23RikQ9D3I0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
5530400C23RikQ9D3I0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Gm10493-201ENSMUST00000097270 612 ntBASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
5530400C23RikQ9D3I0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
5530400C23RikQ9D3I0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.45■□□□□ 0.54
5530400C23RikQ9D3I0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.45■□□□□ 0.54
5530400C23RikQ9D3I0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.45■□□□□ 0.54
5530400C23RikQ9D3I0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
5530400C23RikQ9D3I0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms