Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Snrnp48Q9D361 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.83■□□□□ 0.61
Snrnp48Q9D361 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Gm13234-201ENSMUST00000120010 747 ntBASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.83■□□□□ 0.6
Snrnp48Q9D361 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.82■□□□□ 0.6
Snrnp48Q9D361 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.82■□□□□ 0.6
Snrnp48Q9D361 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Reep4-203ENSMUST00000226563 1444 ntBASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snrnp48Q9D361 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snrnp48Q9D361 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snrnp48Q9D361 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snrnp48Q9D361 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms