Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.37■□□□□ 0.85
Ssr1Q9CY50 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssr1Q9CY50 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssr1Q9CY50 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssr1Q9CY50 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssr1Q9CY50 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssr1Q9CY50 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssr1Q9CY50 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssr1Q9CY50 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssr1Q9CY50 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssr1Q9CY50 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ssr1Q9CY50 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssr1Q9CY50 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ssr1Q9CY50 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Spcs1-204ENSMUST00000226782 949 ntBASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Gm13241-201ENSMUST00000094493 780 ntBASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.32■□□□□ 0.84
Ssr1Q9CY50 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.31■□□□□ 0.84
Ssr1Q9CY50 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ssr1Q9CY50 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms