Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc43Q9CR29 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc43Q9CR29 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Gm26833-201ENSMUST00000180899 440 ntBASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Gm40848-201ENSMUST00000221998 324 ntBASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc43Q9CR29 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc43Q9CR29 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc43Q9CR29 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc43Q9CR29 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc43Q9CR29 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc43Q9CR29 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc43Q9CR29 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms