Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SncaipQ99ME3 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.52■□□□□ 0.71
SncaipQ99ME3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SncaipQ99ME3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.51■□□□□ 0.71
SncaipQ99ME3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.51■□□□□ 0.71
SncaipQ99ME3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SncaipQ99ME3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.49■□□□□ 0.71
SncaipQ99ME3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.49■□□□□ 0.71
SncaipQ99ME3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.49■□□□□ 0.71
SncaipQ99ME3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.49■□□□□ 0.71
SncaipQ99ME3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SncaipQ99ME3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SncaipQ99ME3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SncaipQ99ME3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SncaipQ99ME3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SncaipQ99ME3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms