Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tlr3Q99MB1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Tlr3Q99MB1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tlr3Q99MB1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tlr3Q99MB1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tlr3Q99MB1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Tlr3Q99MB1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tlr3Q99MB1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tlr3Q99MB1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 AV356131-201ENSMUST00000206201 750 ntBASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tlr3Q99MB1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms