Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.66■□□□□ 0.26
Chmp1aQ921W0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp1aQ921W0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp1aQ921W0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.64■□□□□ 0.26
Chmp1aQ921W0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.64■□□□□ 0.25
Chmp1aQ921W0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp1aQ921W0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1aQ921W0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1aQ921W0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms