Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga9Q91XX9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga9Q91XX9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.66■□□□□ 0.58
Pcdhga9Q91XX9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhga9Q91XX9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhga9Q91XX9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhga9Q91XX9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhga9Q91XX9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhga9Q91XX9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhga9Q91XX9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhga9Q91XX9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhga9Q91XX9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms