Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.61■□□□□ 0.57
Usb1Q91W78 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Usb1Q91W78 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usb1Q91W78 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.61■□□□□ 0.57
Usb1Q91W78 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usb1Q91W78 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.61■□□□□ 0.57
Usb1Q91W78 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usb1Q91W78 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usb1Q91W78 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usb1Q91W78 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Usb1Q91W78 Gm10849-201ENSMUST00000100397 618 ntBASIC18.6■□□□□ 0.57
Usb1Q91W78 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.6■□□□□ 0.57
Usb1Q91W78 Gm42569-201ENSMUST00000200539 472 ntBASIC18.6■□□□□ 0.57
Usb1Q91W78 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usb1Q91W78 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.59■□□□□ 0.57
Usb1Q91W78 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usb1Q91W78 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.59■□□□□ 0.57
Usb1Q91W78 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.59■□□□□ 0.57
Usb1Q91W78 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usb1Q91W78 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Usb1Q91W78 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usb1Q91W78 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usb1Q91W78 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.58■□□□□ 0.57
Usb1Q91W78 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usb1Q91W78 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.57
Usb1Q91W78 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Usb1Q91W78 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Usb1Q91W78 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.58■□□□□ 0.56
Usb1Q91W78 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.58■□□□□ 0.56
Usb1Q91W78 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usb1Q91W78 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usb1Q91W78 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usb1Q91W78 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usb1Q91W78 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usb1Q91W78 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Usb1Q91W78 Gm27405-201ENSMUST00000184201 112 ntBASIC18.57■□□□□ 0.56
Usb1Q91W78 Gm7291-201ENSMUST00000199147 382 ntBASIC18.57■□□□□ 0.56
Usb1Q91W78 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.57■□□□□ 0.56
Usb1Q91W78 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usb1Q91W78 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Usb1Q91W78 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Usb1Q91W78 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.56■□□□□ 0.56
Usb1Q91W78 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.56■□□□□ 0.56
Usb1Q91W78 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Usb1Q91W78 Gm26571-201ENSMUST00000181399 666 ntBASIC18.56■□□□□ 0.56
Usb1Q91W78 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.56■□□□□ 0.56
Usb1Q91W78 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usb1Q91W78 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Rarb-207ENSMUST00000225921 2756 ntBASIC18.55■□□□□ 0.56
Usb1Q91W78 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usb1Q91W78 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usb1Q91W78 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Gm10033-202ENSMUST00000211874 928 ntBASIC18.55■□□□□ 0.56
Usb1Q91W78 Gm9988-201ENSMUST00000069786 435 ntBASIC18.55■□□□□ 0.56
Usb1Q91W78 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usb1Q91W78 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms