Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Gm15546-201ENSMUST00000122095 826 ntBASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rab40cQ8VHQ4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rab40cQ8VHQ4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rab40cQ8VHQ4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rab40cQ8VHQ4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rab40cQ8VHQ4 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rab40cQ8VHQ4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms