Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40bQ8VHP8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40bQ8VHP8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Gm15820-201ENSMUST00000201566 728 ntBASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40bQ8VHP8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40bQ8VHP8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rab40bQ8VHP8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40bQ8VHP8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Gm22238-201ENSMUST00000175222 88 ntBASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40bQ8VHP8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40bQ8VHP8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40bQ8VHP8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms