Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.01■□□□□ 0.63
Rpa1Q8VEE4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Gm37811-201ENSMUST00000192416 2601 ntBASIC19■□□□□ 0.63
Rpa1Q8VEE4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpa1Q8VEE4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpa1Q8VEE4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpa1Q8VEE4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpa1Q8VEE4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rpa1Q8VEE4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpa1Q8VEE4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rpa1Q8VEE4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpa1Q8VEE4 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms