Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf8Q8VC56 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf8Q8VC56 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf8Q8VC56 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Gm43017-201ENSMUST00000198296 752 ntBASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf8Q8VC56 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf8Q8VC56 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf8Q8VC56 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf8Q8VC56 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Gm26833-201ENSMUST00000180899 440 ntBASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf8Q8VC56 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 AA386476-201ENSMUST00000098781 1665 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms