Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp33Q8R5K2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Usp33Q8R5K2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp33Q8R5K2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp33Q8R5K2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.71■■□□□ 1.07
Usp33Q8R5K2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Usp33Q8R5K2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Usp33Q8R5K2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Dio3-201ENSMUST00000097228 1449 ntBASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp33Q8R5K2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp33Q8R5K2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Usp33Q8R5K2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Gm715-201ENSMUST00000117865 831 ntBASIC21.67■■□□□ 1.06
Usp33Q8R5K2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp33Q8R5K2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp33Q8R5K2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.65■■□□□ 1.06
Usp33Q8R5K2 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp33Q8R5K2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp33Q8R5K2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Usp33Q8R5K2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms