Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZSWIM2Q8NEG5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ZSWIM2Q8NEG5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 MIR935-201ENST00000401179 91 ntBASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 YBX1P1-201ENST00000445822 960 ntBASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 RARRES2P6-201ENST00000567333 442 ntBASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 AC005224.4-201ENST00000583262 1652 ntBASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.37■■□□□ 1.33
ZSWIM2Q8NEG5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 AC055733.4-201ENST00000638462 1354 ntBASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZSWIM2Q8NEG5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 AP006587.3-201ENST00000525742 1516 ntBASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
ZSWIM2Q8NEG5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 CCDC92B-201ENST00000575506 885 ntBASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZSWIM2Q8NEG5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 AC097381.1-201ENST00000429019 1296 ntBASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 MIR6821-201ENST00000617625 74 ntBASIC23.33■■□□□ 1.33
ZSWIM2Q8NEG5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZSWIM2Q8NEG5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 AC123595.1-201ENST00000440769 1046 ntBASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 TERF1P2-201ENST00000583350 1212 ntBASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 AC003102.1-202ENST00000563394 1796 ntBASIC23.32■■□□□ 1.32
ZSWIM2Q8NEG5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L2-201ENST00000561772 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 KRT18P61-201ENST00000585825 1298 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L6-201ENST00000626483 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L1-201ENST00000627662 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L8-201ENST00000629013 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L3-201ENST00000630187 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L7-201ENST00000630678 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 DUX4L5-201ENST00000630834 1275 ntBASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ZSWIM2Q8NEG5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms