Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Gm27454-201ENSMUST00000185090 204 ntBASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgcs1Q8JZK9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgcs1Q8JZK9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgcs1Q8JZK9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgcs1Q8JZK9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
Hmgcs1Q8JZK9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgcs1Q8JZK9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hmgcs1Q8JZK9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hmgcs1Q8JZK9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms