Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.12■□□□□ 0.49
CroccQ8CJ40 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.12■□□□□ 0.49
CroccQ8CJ40 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.12■□□□□ 0.49
CroccQ8CJ40 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.12■□□□□ 0.49
CroccQ8CJ40 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CroccQ8CJ40 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.11■□□□□ 0.49
CroccQ8CJ40 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Gm10033-202ENSMUST00000211874 928 ntBASIC18.11■□□□□ 0.49
CroccQ8CJ40 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CroccQ8CJ40 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Gm13234-201ENSMUST00000120010 747 ntBASIC18.1■□□□□ 0.49
CroccQ8CJ40 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.1■□□□□ 0.49
CroccQ8CJ40 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CroccQ8CJ40 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.09■□□□□ 0.49
CroccQ8CJ40 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CroccQ8CJ40 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CroccQ8CJ40 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CroccQ8CJ40 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CroccQ8CJ40 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CroccQ8CJ40 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CroccQ8CJ40 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CroccQ8CJ40 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.08■□□□□ 0.48
CroccQ8CJ40 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CroccQ8CJ40 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CroccQ8CJ40 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CroccQ8CJ40 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.06■□□□□ 0.48
CroccQ8CJ40 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.06■□□□□ 0.48
CroccQ8CJ40 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CroccQ8CJ40 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms