Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps50Q8CI71 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps50Q8CI71 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps50Q8CI71 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps50Q8CI71 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps50Q8CI71 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps50Q8CI71 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps50Q8CI71 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Gm11421-201ENSMUST00000122124 294 ntBASIC18.44■□□□□ 0.54
Vps50Q8CI71 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps50Q8CI71 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.43■□□□□ 0.54
Vps50Q8CI71 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.43■□□□□ 0.54
Vps50Q8CI71 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Gm10493-201ENSMUST00000097270 612 ntBASIC18.43■□□□□ 0.54
Vps50Q8CI71 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps50Q8CI71 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.42■□□□□ 0.54
Vps50Q8CI71 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.42■□□□□ 0.54
Vps50Q8CI71 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vps50Q8CI71 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps50Q8CI71 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Vps50Q8CI71 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps50Q8CI71 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms