Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h3Q8CHP0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h3Q8CHP0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3h3Q8CHP0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Zc3h3Q8CHP0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Zc3h3Q8CHP0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h3Q8CHP0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Gm23634-201ENSMUST00000175071 91 ntBASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h3Q8CHP0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Gm43183-201ENSMUST00000200632 547 ntBASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Flg-201ENSMUST00000050758 1488 ntBASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h3Q8CHP0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.55■□□□□ 0.56
Zc3h3Q8CHP0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h3Q8CHP0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms