Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps53Q8CCB4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Iqck-206ENSMUST00000208658 2891 ntBASIC21.93■■□□□ 1.1
Vps53Q8CCB4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps53Q8CCB4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps53Q8CCB4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps53Q8CCB4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps53Q8CCB4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps53Q8CCB4 Gm13234-201ENSMUST00000120010 747 ntBASIC21.89■■□□□ 1.09
Vps53Q8CCB4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.89■■□□□ 1.09
Vps53Q8CCB4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps53Q8CCB4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps53Q8CCB4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps53Q8CCB4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps53Q8CCB4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Vps53Q8CCB4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps53Q8CCB4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vps53Q8CCB4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps53Q8CCB4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps53Q8CCB4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms