Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Ska3Q8C263 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska3Q8C263 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.71■□□□□ 0.43
Ska3Q8C263 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.71■□□□□ 0.43
Ska3Q8C263 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ska3Q8C263 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ska3Q8C263 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska3Q8C263 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Ska3Q8C263 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Ska3Q8C263 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ska3Q8C263 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ska3Q8C263 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ska3Q8C263 Gm10033-202ENSMUST00000211874 928 ntBASIC17.7■□□□□ 0.42
Ska3Q8C263 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska3Q8C263 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Ska3Q8C263 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.69■□□□□ 0.42
Ska3Q8C263 Gm13146-201ENSMUST00000118508 780 ntBASIC17.69■□□□□ 0.42
Ska3Q8C263 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.69■□□□□ 0.42
Ska3Q8C263 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.69■□□□□ 0.42
Ska3Q8C263 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.69■□□□□ 0.42
Ska3Q8C263 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.69■□□□□ 0.42
Ska3Q8C263 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.69■□□□□ 0.42
Ska3Q8C263 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ska3Q8C263 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ska3Q8C263 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ska3Q8C263 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.68■□□□□ 0.42
Ska3Q8C263 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.68■□□□□ 0.42
Ska3Q8C263 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ska3Q8C263 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Golph3-205ENSMUST00000228671 2842 ntBASIC17.67■□□□□ 0.42
Ska3Q8C263 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ska3Q8C263 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ska3Q8C263 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ska3Q8C263 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Ska3Q8C263 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ska3Q8C263 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.66■□□□□ 0.42
Ska3Q8C263 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.66■□□□□ 0.42
Ska3Q8C263 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.66■□□□□ 0.42
Ska3Q8C263 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ska3Q8C263 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ska3Q8C263 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms