Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Mir7075-201ENSMUST00000184187 82 ntBASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne3Q8BT60 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne3Q8BT60 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne3Q8BT60 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.16■□□□□ 0.5
Cpne3Q8BT60 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne3Q8BT60 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne3Q8BT60 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.14■□□□□ 0.49
Cpne3Q8BT60 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms