Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Suds3Q8BR65 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Gm8495-201ENSMUST00000188740 694 ntBASIC19.28■□□□□ 0.68
Suds3Q8BR65 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Suds3Q8BR65 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Suds3Q8BR65 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Suds3Q8BR65 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Suds3Q8BR65 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Suds3Q8BR65 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Suds3Q8BR65 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Suds3Q8BR65 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Suds3Q8BR65 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Suds3Q8BR65 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.25■□□□□ 0.67
Suds3Q8BR65 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Suds3Q8BR65 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Suds3Q8BR65 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Suds3Q8BR65 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.24■□□□□ 0.67
Suds3Q8BR65 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Suds3Q8BR65 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Suds3Q8BR65 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Suds3Q8BR65 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms