Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Prpf18Q8BM39 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.91■□□□□ 0.46
Prpf18Q8BM39 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf18Q8BM39 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf18Q8BM39 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Prpf18Q8BM39 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Prpf18Q8BM39 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf18Q8BM39 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms