Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrtm4Q80XG9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrtm4Q80XG9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrtm4Q80XG9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrtm4Q80XG9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrtm4Q80XG9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrtm4Q80XG9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Lrrtm4Q80XG9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrtm4Q80XG9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms