Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.2■□□□□ 0.5
Trim36Q80WG7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim36Q80WG7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.19■□□□□ 0.5
Trim36Q80WG7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim36Q80WG7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.19■□□□□ 0.5
Trim36Q80WG7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim36Q80WG7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.17■□□□□ 0.5
Trim36Q80WG7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim36Q80WG7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.16■□□□□ 0.5
Trim36Q80WG7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim36Q80WG7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.15■□□□□ 0.5
Trim36Q80WG7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim36Q80WG7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim36Q80WG7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim36Q80WG7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.14■□□□□ 0.49
Trim36Q80WG7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim36Q80WG7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms