Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Prpf40bQ80W14 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prpf40bQ80W14 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf40bQ80W14 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf40bQ80W14 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Prpf40bQ80W14 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Prpf40bQ80W14 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Prpf40bQ80W14 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Prpf40bQ80W14 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf40bQ80W14 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf40bQ80W14 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf40bQ80W14 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Gm38205-201ENSMUST00000192243 258 ntBASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf40bQ80W14 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms