Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.39■□□□□ 0.53
Scn4bQ7M729 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn4bQ7M729 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 BC021767-201ENSMUST00000126387 1716 ntBASIC18.37■□□□□ 0.53
Scn4bQ7M729 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.37■□□□□ 0.53
Scn4bQ7M729 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Scn4bQ7M729 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.36■□□□□ 0.53
Scn4bQ7M729 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn4bQ7M729 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn4bQ7M729 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn4bQ7M729 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn4bQ7M729 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn4bQ7M729 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn4bQ7M729 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn4bQ7M729 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms