Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Casc4Q6P2L7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Gm7860-201ENSMUST00000121190 879 ntBASIC19.06■□□□□ 0.64
Casc4Q6P2L7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc4Q6P2L7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Casc4Q6P2L7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc4Q6P2L7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.03■□□□□ 0.64
Casc4Q6P2L7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Casc4Q6P2L7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Casc4Q6P2L7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.02■□□□□ 0.63
Casc4Q6P2L7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Casc4Q6P2L7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms