Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Irf4Q64287 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.56■□□□□ 0.56
Irf4Q64287 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Irf4Q64287 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.56■□□□□ 0.56
Irf4Q64287 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Irf4Q64287 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.56■□□□□ 0.56
Irf4Q64287 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Irf4Q64287 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Irf4Q64287 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.55■□□□□ 0.56
Irf4Q64287 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Irf4Q64287 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Gm6211-202ENSMUST00000167849 925 ntBASIC18.55■□□□□ 0.56
Irf4Q64287 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Irf4Q64287 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.55■□□□□ 0.56
Irf4Q64287 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Irf4Q64287 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Irf4Q64287 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.54■□□□□ 0.56
Irf4Q64287 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Irf4Q64287 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Irf4Q64287 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Irf4Q64287 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.54■□□□□ 0.56
Irf4Q64287 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.54■□□□□ 0.56
Irf4Q64287 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Irf4Q64287 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Irf4Q64287 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Irf4Q64287 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.53■□□□□ 0.56
Irf4Q64287 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Irf4Q64287 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Irf4Q64287 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Irf4Q64287 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Irf4Q64287 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Irf4Q64287 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Irf4Q64287 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Irf4Q64287 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Irf4Q64287 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.52■□□□□ 0.55
Irf4Q64287 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Gm27011-201ENSMUST00000182352 972 ntBASIC18.51■□□□□ 0.55
Irf4Q64287 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.51■□□□□ 0.55
Irf4Q64287 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.51■□□□□ 0.55
Irf4Q64287 Gm5408-201ENSMUST00000197998 747 ntBASIC18.51■□□□□ 0.55
Irf4Q64287 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.51■□□□□ 0.55
Irf4Q64287 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Irf4Q64287 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Irf4Q64287 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf4Q64287 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Irf4Q64287 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Irf4Q64287 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Irf4Q64287 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms